PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY44193.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

NF-YB

Protein Properties

Length: 206aa MW: 22915.6 Da PI: 5.078

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY44193.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	177	1.8e-55	43	136	1	94
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 vreqdrflPian++rimkk lPan+ki+kdak+tvqecvsefisfvtseasdkcq+ekrktingddllwa+atlGfedy+ plkvyl++yre+ TEY44193.1 43 VREQDRFLPIANIGRIMKKGLPANGKIAKDAKDTVQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEDYITPLKVYLARYREVS 136 69******************************************************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence
MNSSLFLRSI DCLCLFRFFF SFFGGRMSDD NGGGGDHSPQ SSVREQDRFL PIANIGRIMK 60 KGLPANGKIA KDAKDTVQEC VSEFISFVTS EASDKCQKEK RKTINGDDLL WAMATLGFED 120 YITPLKVYLA RYREVSESLL FFNPYSIYFD YSLSPSLEGD TKGSARGADG APKRETVGTQ 180 LGSDAQFAHQ DSYAQGFGYS NSQIEY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53340.1	1e-69	NF-YB family protein