PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY44306.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 190aa MW: 20017.4 Da PI: 8.6917

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY44306.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.5	0.0009	59	81	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k F + L H +H TEY44306.1 59 YKCSVCDKAFGSYQALGGHKASH 81 9*********9999998888777 PP
2	zf-C2H2	15	7.2e-05	108	130	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+ksF++ L H r+H TEY44306.1 108 HECSICHKSFPTGQALGGHKRRH 130 78*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence
MALDTAPTLP SSKRTKRPRS REPTEEEYLA LCLVMLARGG GPTSASAKAP AADPSNLIYK 60 CSVCDKAFGS YQALGGHKAS HRKLSADHDH AAASTVTAAA ASCGGRTHEC SICHKSFPTG 120 QALGGHKRRH YDGGSSGVTT SEVAGSAGSV RNFDLNFPAK PEFWLGFGGD DEVECPHPFK 180 KSRLGNFLNI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27730.1	3e-38	C2H2 family protein