PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY44307.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 157aa    MW: 16922.7 Da    PI: 7.2633
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY44307.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26092.93.8e-292105199
      DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                 +C++C++lrr+C+++C+l+p++     p++q++++ ++ k+FG+s +l +++++p ++r+++++sl+y A+ r+ +Pv+Gavg++++++++++q+++e+
  TEY44307.1   2 SCSGCRILRRGCSDHCILRPCLdwiqsPDAQAHATLFLSKFFGRSCLLTFIASIPVSKRSALFQSLLYDACGRTVNPVNGAVGLLSTGNWHICQAAVET 100
                 6*************************99**********************************************************************9 PP

      DUF260  95 allke 99 
                 +l+++
  TEY44307.1 101 VLAGK 105
                 98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MSCSGCRILR RGCSDHCILR PCLDWIQSPD AQAHATLFLS KFFGRSCLLT FIASIPVSKR  60
SALFQSLLYD ACGRTVNPVN GAVGLLSTGN WHICQAAVET VLAGKVLLPI SLGSPHGPMQ  120
DCFSQLGWVP NCIETMPESG VDQVGAEEMP KLLNLFA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67420.12e-57LBD family protein