PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY44479.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 166aa MW: 18126.4 Da PI: 7.3007

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY44479.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	139.7	9.6e-44	10	108	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC ++Cv++pyfp e+p+kfanvhk+FGasnv kll++l +++r+da++sl+yeAear+rdPvyG++g i+ lq+q+++l+ el++ ++ TEY44479.1 10 PCAACKFLRRKCIPGCVFSPYFPPEEPQKFANVHKIFGASNVAKLLNELLPHQRDDAVNSLAYEAEARVRDPVYGCIGAITFLQRQVDRLQMELDASNA 108 7********************************************************************************************998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 166 aa Download sequence
MASSSSYNPP CAACKFLRRK CIPGCVFSPY FPPEEPQKFA NVHKIFGASN VAKLLNELLP 60 HQRDDAVNSL AYEAEARVRD PVYGCIGAIT FLQRQVDRLQ MELDASNADL IRFACSNVPL 120 QATQPPPAGT RNGGRFYQAG GGVQISYDVP WNDIYNSHGG GMDGTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63090.2	1e-71	LBD family protein