PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY44480.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 200aa MW: 22118.4 Da PI: 8.5794

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY44480.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	133.5	8.3e-42	10	108	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC+++C+++p+fp e+++kf nvhk+FGa+nv kllk+l +++r +a+ssl+yeAear+rdPv G++gvi++lq+q+++l++el+ +++ TEY44480.1 10 PCAACKFLRRKCVPGCIFSPHFPPEEKEKFVNVHKIFGARNVAKLLKELLPHQRATAASSLAYEAEARVRDPVLGCFGVISSLQRQVDRLRKELHNANA 108 7*********************************************************************************************98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 200 aa Download sequence
MTYSSSYNSP CAACKFLRRK CVPGCIFSPH FPPEEKEKFV NVHKIFGARN VAKLLKELLP 60 HQRATAASSL AYEAEARVRD PVLGCFGVIS SLQRQVDRLR KELHNANADL VWFACNDISL 120 HTAQPRTPEA IGGGNVDFGA GEGGGILYQT GENLIDGFLY LVQPSRRRKC ITGCVNSPHF 180 PPEELLKFAN VHKLDTSLPH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63090.2	2e-58	LBD family protein