PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY45133.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

CO-like

Protein Properties

Length: 325aa MW: 37005.6 Da PI: 6.2574

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY45133.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	24.3	6.4e-08	17	60	3	40
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 +r C+ + k++++fC ++ +lC++C + H+ H++v TEY45133.1 17 ARACDSCLLKRARWFCAADDAFLCQSCDGAVHSAnqlasrHERV 60 578*****************************657788888766 PP
2	CCT	68.7	1.5e-23	266	309	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea+++RY+eKr+tR+F+KkirYe+RK +Ae+RpR+KGrFvk++ TEY45133.1 266 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRT 309 9*****************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MNLNRSKASN VLGAKTARAC DSCLLKRARW FCAADDAFLC QSCDGAVHSA NQLASRHERV 60 HLETSSCAAP SWHQGFTKKA RTPRHGKSRA AEPPVIHQLP VVPEMSSDDP FPEETEDQLF 120 CRVPVFDEEI LVKGEELGFF DDDHELNLEE LLSTCDDEFA ADVESLLGNG NTVDEKSVKM 180 EDRGFEPEVN WELDFTGGEE EMREVRAMEN ESRKLLKLDY EAIIAAWASQ GSPWTDGIRP 240 HFNLDIIMSD EWGGGKGGRI WSDAGREARV SRYREKRRTR LFSKKIRYEV RKLNAEKRPR 300 MKGRFVKRTS FLPANSILNY HLITK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	277	293	RRTRLFSKKIRYEVRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25440.1	6e-77	CO-like family protein