PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY45660.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 148aa    MW: 15967.4 Da    PI: 4.9315
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY45660.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26097.51.4e-302103197
      DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                 +C++C+vlrr+C+++C+l+p++     p++q++++ +v k+FG+s +++l++a+p+++r+ +++sl++eA+ r  +Pv+Gavg++ +++++++++++e+
  TEY45660.1   2 SCNGCRVLRRGCSDECILRPCLewiesPQAQAQATLFVSKFFGRSDLMSLVAAVPHSQRSVLFQSLLFEACGRKVNPVNGAVGLLITGNWHICRAAVET 100
                 6***********************************************************************************************999 PP

      DUF260  95 all 97 
                 +l+
  TEY45660.1 101 VLA 103
                 876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MSCNGCRVLR RGCSDECILR PCLEWIESPQ AQAQATLFVS KFFGRSDLMS LVAAVPHSQR  60
SVLFQSLLFE ACGRKVNPVN GAVGLLITGN WHICRAAVET VLAGGVITPI SPPDGVVKCM  120
ETEASEISEE SPESGESDKE PKLLNLFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49940.13e-58LBD family protein