PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY45723.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C3H
Protein Properties Length: 310aa    MW: 33688.1 Da    PI: 8.8488
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY45723.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH34.24.2e-11144170127
                 --S---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
                 yk +lC+++  + +C++G+ C+FaHg+
  TEY45723.1 144 YKNRLCHYWETSRICQFGSECQFAHGK 170
                 899**********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MNRMYLENKR DTKGPKFDSG VLSPINLMNM TGSRRSRSLF DPYASDSSDS PSPLMKFLRS  60
VDPAAGGASS PVFVTPVKVE EDVIVMDGIS VPKSNNSSGE VRLRLPLMSS NSVNCSFGKS  120
NSPASSSSSG SGGRRARVEN IKSYKNRLCH YWETSRICQF GSECQFAHGK EELRHHRFSG  180
KIKLEISKLN SSFEGSSPSP YSSKFNRNSR VNAVSAEVEA FSVPPLSPEM VFPASPISAK  240
QVSGTRAIPV TALLCSDWTP ESDGIEITLP CVEKSPSKED VDAFIANVLY GAKAKKRLPV  300
FVEICPDSAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32360.14e-08C3H family protein