PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY45949.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 627aa    MW: 68390.8 Da    PI: 6.3818
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY45949.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS415.93.6e-1272686232374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  +lLl+cAeavs+++le+a+++L ++s+ a+p g++ qR+aayf eA++ar+++s+ ++y+alp+ + +    ++ ++a+++f+ +sP++kfsh+taNq
  TEY45949.1 268 LTLLLQCAEAVSADNLEEANRMLLEISQVATPFGTSAQRVAAYFSEAMSARIVSSCLGIYAALPTVPHT----QKLASAFQVFNGISPLVKFSHFTANQ 362
                 579**************************************************************9997....789999******************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpg 199
                 aI ea+e+e+rvHiiD+di+qGlQWp L++ LasRp+gpp +R+Tg+g+    s+e+l++tg+rL++fA++lg+pfef + +a+++ +l++e+L+++++
  TEY45949.1 363 AIQEALEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPFVRLTGLGN----STEALQATGKRLSDFADKLGLPFEFCP-LADKVGNLNPEKLNISKR 456
                 *************************************************....9**************************.6***************** PP

        GRAS 200 EalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvv 298
                 Ea+aV++    h+l+d ++s ++    +L l+ +lsPkvv+vveq+++h ++sFl rf+ea++yysalfdsl a +++eseer++vE++ll+rei+nv+
  TEY45949.1 457 EAVAVHWLQ--HSLYDVTGSNTN----TLGLLHRLSPKVVTVVEQDLSH-AGSFLGRFVEAIHYYSALFDSLGACYGEESEERHVVEQQLLSREIRNVL 548
                 ********9..999999999999....**********************.899********************************************** PP

        GRAS 299 acegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +  g +rr + + +++Wre+le++GFk ++l  +aa+qa lll +++sdgy++ e++g+l lgWkd  L+++SaWr
  TEY45949.1 549 SVGGPSRRGEIK-FNNWREKLEQSGFKGISLAGNAAAQATLLLGMFPSDGYTLVEDNGALKLGWKDLCLLTASAWR 623
                 ******998887.**************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 627 aa     Download sequence    
MAAKAAFGLV SEAEEVALMS TTGGGKLVRK RAASEMGMEM DLDGVDRLIC RRTSNYPNPL  60
TPNYSTRPNF NETTTQPLLS PSPSPLPSVC VFSGLPLFPP APPMEDTIDG IIRDLIHSSS  120
HVSIPQLILN VREIIHPCNP NLAALLEQRL RSLTRKPPPQ QPINNNVLLT QVGGFAANDP  180
LTDWSSPSSH FLFHPNNIPP RTPPPPPPPP PTSAAAVTTT TTTSSFVTMD HAIQPEAEEQ  240
PNQHKSPSAT IREERRQQEK DEQGLHLLTL LLQCAEAVSA DNLEEANRML LEISQVATPF  300
GTSAQRVAAY FSEAMSARIV SSCLGIYAAL PTVPHTQKLA SAFQVFNGIS PLVKFSHFTA  360
NQAIQEALER EDRVHIIDLD IMQGLQWPGL FHILASRPGG PPFVRLTGLG NSTEALQATG  420
KRLSDFADKL GLPFEFCPLA DKVGNLNPEK LNISKREAVA VHWLQHSLYD VTGSNTNTLG  480
LLHRLSPKVV TVVEQDLSHA GSFLGRFVEA IHYYSALFDS LGACYGEESE ERHVVEQQLL  540
SREIRNVLSV GGPSRRGEIK FNNWREKLEQ SGFKGISLAG NAAAQATLLL GMFPSDGYTL  600
VEDNGALKLG WKDLCLLTAS AWRPSPH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.10.0GRAS family protein