PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY46626.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 427aa MW: 49793.9 Da PI: 8.3237

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY46626.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	20.7	1.1e-06	63	84	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C++Cg sF+ + +Lk+H+++H TEY46626.1 63 VCEHCGVSFRKPALLKQHMQSH 84 6*******************99 PP
2	zf-C2H2	18.2	6.8e-06	159	183	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp dC+ s++rk +L+rH+ H TEY46626.1 159 FICPldDCHSSYRRKGHLTRHMLQH 183 78********************988 PP
3	zf-C2H2	15.2	6.2e-05	188	213	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 ++C+ C+k F+ + n++rH + H TEY46626.1 188 FECTfeGCNKNFTLQGNMTRHVKEfH 213 789999****************9988 PP
4	zf-C2H2	15.9	3.8e-05	224	248	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C+ Cgk+F+ s Lk+H +H TEY46626.1 224 HVCSehGCGKVFKYLSKLKKHEDSH 248 689999***************9888 PP
5	zf-C2H2	11.6	0.00089	315	339	2	23
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 kC+ C +Fs+ snL++Hi+ H TEY46626.1 315 KCSfkGCMLTFSNTSNLNQHIKAvH 339 577778889************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MAVDEVDKAR DAIFRDIRRY YCEFCGICRS KKTLIAAHIR THHEEESKKE LNEEKEHGEK 60 LNVCEHCGVS FRKPALLKQH MQSHSLEVSF SIEFCSEYNN FLAVYLHMYF IFIGSQIKEL 120 QNARGRKCYL EWISTRQGTA CEAPSSVPQS RLLFCERPFI CPLDDCHSSY RRKGHLTRHM 180 LQHEGKLFEC TFEGCNKNFT LQGNMTRHVK EFHDESASAE VKQHVCSEHG CGKVFKYLSK 240 LKKHEDSHVK LDSVEAFCAE PGCMKYFSNE QCLKEHIRSC HQHIMCDQCG TKQLKKNIKR 300 HMRMHEEGPS LERIKCSFKG CMLTFSNTSN LNQHIKAVHL ELKPFVCGMP GCHERFAFKH 360 VRNRHEQTGC HIYTRGNFEE SDEQIWSRPR GGRKRKYPVI ETLLRKRIVP PSESELASND 420 EHNNSSC

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MAVDEVDKAR DAIFRDIRRY YCEFCGICRS KKTLIAAHIR THHEEESKKE LNEEKEHGEK  60
LNVCEHCGVS FRKPALLKQH MQSHSLEVSF SIEFCSEYNN FLAVYLHMYF IFIGSQIKEL  120
QNARGRKCYL EWISTRQGTA CEAPSSVPQS RLLFCERPFI CPLDDCHSSY RRKGHLTRHM  180
LQHEGKLFEC TFEGCNKNFT LQGNMTRHVK EFHDESASAE VKQHVCSEHG CGKVFKYLSK  240
LKKHEDSHVK LDSVEAFCAE PGCMKYFSNE QCLKEHIRSC HQHIMCDQCG TKQLKKNIKR  300
HMRMHEEGPS LERIKCSFKG CMLTFSNTSN LNQHIKAVHL ELKPFVCGMP GCHERFAFKH  360
VRNRHEQTGC HIYTRGNFEE SDEQIWSRPR GGRKRKYPVI ETLLRKRIVP PSESELASND  420
EHNNSSC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	388	396	RPRGGRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.2	1e-105	C2H2 family protein