PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY47158.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 248aa MW: 28129.7 Da PI: 7.1481

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY47158.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	99.2	1.7e-31	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRrng+lKKA+ELSvLC+aeva+iifss+gklye+++ TEY47158.1 9 KRIENKINRQVTFSKRRNGLLKKAYELSVLCEAEVALIIFSSRGKLYEFAT 59 79***********************************************86 PP
2	K-box	89.3	7.1e-30	79	167	8	96
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 + e +++s++qe++kLk+++e+Lqr+qRhllGe+L++Ls+keLq+Le+qLe +l + R++K+++l+e++eel +ke+++ + nk+L+ TEY47158.1 79 NSGEGETQSWYQEFSKLKAKYESLQRTQRHLLGENLGTLSHKELQNLEKQLEGALVQARQRKKHILMEEMEELGRKERQIGDMNKQLKI 167 3567789*******************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MGRGRVELKR IENKINRQVT FSKRRNGLLK KAYELSVLCE AEVALIIFSS RGKLYEFATT 60 STTETLERYH RCSLNHQENS GEGETQSWYQ EFSKLKAKYE SLQRTQRHLL GENLGTLSHK 120 ELQNLEKQLE GALVQARQRK KHILMEEMEE LGRKERQIGD MNKQLKIRVS LEMSSVEAED 180 QQRTGALSLP WNEGGDAATS AGTSGFPLLA TPPEVEPEPI LQIGYNHYNV GEGSSAAVDT 240 NFMQGWTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45650.1	5e-90	MIKC_MADS family protein