PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY47184.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 242aa    MW: 26056.8 Da    PI: 8.0151
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY47184.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260127.37.1e-40311311100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkC+++C++apyf +eq +++fa+vhk+FGasnv+kll+++p ++r da+ +++yeA+ r+rdP+yG+v+++++lqqq+ +l++el++++
  TEY47184.1  31 PCGACKFLRRKCVAGCIFAPYFDSEQgAAHFAAVHKVFGASNVSKLLHHIPSQKRLDAVVTICYEAQSRLRDPIYGCVAHVFALQQQVVNLQQELSYIQ 129
                 7***********************9989********************************************************************998 PP

      DUF260  99 ee 100
                 ++
  TEY47184.1 130 AH 131
                 76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MGGLLHRVAS KSQSDIMSSE NAAGSSGGGG PCGACKFLRR KCVAGCIFAP YFDSEQGAAH  60
FAAVHKVFGA SNVSKLLHHI PSQKRLDAVV TICYEAQSRL RDPIYGCVAH VFALQQQVVN  120
LQQELSYIQA HLAALELPTP PPLQPQQLMV PASQSILDLP PIPAAYDFSA MCGDMVAPPS  180
LWSVYPRQQI DQQRQFSNAA VGGGGDLQEL ARELLNRHAP PMVVRCGNQA SSLPPNSRQM  240
RD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00220.13e-57LBD family protein