PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY47185.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 180aa    MW: 19489.3 Da    PI: 7.4174
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY47185.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260124.55.2e-39111111100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkC+k+Cv+apyf ++q +++fa+vh++FGasn +kll ++p++ r da+ +l+yeA ar+rdPvyG+v++i++lqqq+ +l+aela+++
  TEY47185.1  11 PCGACKFLRRKCVKGCVFAPYFDSDQgAAHFAAVHRVFGASNASKLLLRIPPHCRLDAVVTLCYEALARVRDPVYGCVAHIFTLQQQVVNLQAELAHTQ 109
                 7***********************9989********************************************************************998 PP

      DUF260  99 ee 100
                 ++
  TEY47185.1 110 AR 111
                 76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MSCVVEGGGG PCGACKFLRR KCVKGCVFAP YFDSDQGAAH FAAVHRVFGA SNASKLLLRI  60
PPHCRLDAVV TLCYEALARV RDPVYGCVAH IFTLQQQVVN LQAELAHTQA RISTLQHTPS  120
SLPVLNSSMV ETSPSSSLGM VSFCSSVDQE VEDDGDLQSL AREYASRYFP GVRFMPPTPH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45410.11e-66LBD family protein