PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY47519.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 247aa MW: 28225 Da PI: 8.3054

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY47519.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	96.4	1.2e-30	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCda va+iifs++gklye++s TEY47519.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAVVALIIFSNRGKLYEFCS 59 79***********************************************96 PP
2	K-box	90.9	2.3e-30	77	174	3	100
K-box 3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + + ++l++ ++s+++e+ kLk+++e+Lqr qR+llG++L++L++++L+++e+qLe+slk+iRs++++++l+q+++lq kek + ++nkaL++klee TEY47519.1 77 SLEVNHLDKDIEQSSYREYLKLKAKYESLQRYQRQLLGDNLGPLNINDLEHIEHQLETSLKHIRSTRTQVMLDQLSDLQSKEKLMLDANKALESKLEE 174 566677888899***********************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AVVALIIFSN RGKLYEFCST 60 SNMLKTLERY QKCSYGSLEV NHLDKDIEQS SYREYLKLKA KYESLQRYQR QLLGDNLGPL 120 NINDLEHIEH QLETSLKHIR STRTQVMLDQ LSDLQSKEKL MLDANKALES KLEEIYAANH 180 IQQSWVGGSG EHSNNYAPHH AQSQAFFQPL DCNSTLQIGY SEPVSSSQMT AATDVQNVNG 240 IVPGWML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02310.1	1e-114	MIKC_MADS family protein