PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY47803.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 172aa MW: 19156.7 Da PI: 7.1481

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY47803.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	140.8	4.4e-44	7	106	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +Ca+Ck+lrr+CakdC+++pyfp ++p+kfa+vhk+FGasnv+k+l++lp ++r da+sslvyeA+ar+rdPvyG+vg i+ lq+q++ql+ +la++++ TEY47803.1 7 PCASCKLLRRRCAKDCIFSPYFPPDDPHKFAIVHKVFGASNVSKMLQELPFHQRGDAVSSLVYEANARTRDPVYGCVGAISFLQNQVSQLQMQLAVAQA 105 7***********************************************************************************************998 PP DUF260 100 e 100 e TEY47803.1 106 E 106 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence
MGGGTSPCAS CKLLRRRCAK DCIFSPYFPP DDPHKFAIVH KVFGASNVSK MLQELPFHQR 60 GDAVSSLVYE ANARTRDPVY GCVGAISFLQ NQVSQLQMQL AVAQAEILCI QMQQEQQQPP 120 PLMTHNNDHH SGEDDKSSLV NFSSLQHYLS FASTSSTNNV MQDPLKRESL WT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30130.1	2e-77	LBD family protein