PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY47882.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 137aa    MW: 15187.3 Da    PI: 8.8273
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY47882.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF369e-121053245
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                 i nks r++tf+kRr+g++ K eE +   d +  vi fs  g+
  TEY47882.1 10 LIANKSYRHTTFTKRRKGLMNKTEEFCKVSDSKGIVISFSDAGN 53
                699*************************************9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MVRRKIDIKL IANKSYRHTT FTKRRKGLMN KTEEFCKVSD SKGIVISFSD AGNCFCLGHP  60
DVGSVLNNYL GDSSSAIATE AEKIIGDALE SGKWVEAVKG LRLDGLDRVY VELENATRKL  120
EALAAAKEET QSYGRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65360.12e-14M-type_MADS family protein