PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY47883.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 125aa    MW: 14028.8 Da    PI: 5.0581
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY47883.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF45.31.1e-14854147
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47
                k ie+k +r++tf+kRr+g++KK e L+   d ++ vi fs tg+ y
  TEY47883.1  8 KLIEDKPKRHTTFTKRRQGLMKKTEQLCEISDSQAVVIAFSGTGNCY 54
                569****************************************9866 PP
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    
MRRKIEIKLI EDKPKRHTTF TKRRQGLMKK TEQLCEISDS QAVVIAFSGT GNCYCLGHPH  60
ADTVLDRYFG ESSSADEVER RIGDAMKSGR WVDAATGLEL DELDELLAEL EETTRRVEAL  120
AAESG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01530.11e-15M-type_MADS family protein