PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY48411.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C3H
Protein Properties Length: 314aa    MW: 36239.3 Da    PI: 6.0333
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY48411.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.66.9e-06730126
                --S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHg 26
                ykt+lC +++r G C++  +CkFaHg
  TEY48411.1  7 YKTRLCAHYQR-GCCRF-ISCKFAHG 30
                9**********.*****.*******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MVGRDTYKTR LCAHYQRGCC RFISCKFAHG SAELRRPFNE IRYNSAEVFH ATSDACLDVL  60
SSQLELKTFV HLESAVVNGN RGSVELRRRI HRNRSPLCNS PDRRDGDSSP EKRMSVPDRN  120
VRKRTRWDVR GDGSIDQIED KAKMQIDDQL RETYAEIRRL EDDKQRLQMY LEDKDKEASS  180
LTFEIHELEM QLSEEKKEGN RFKTKVKKFI EAHNCHLRLQ DELKRSEAQL QNLVEHLDSD  240
VGEGSEDDPN IKALRDDEGR LNSSSRVEVR ETSPQARLSA PDADGPCCHL QYKGNDENVD  300
VYGVDKETVE VDIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21810.14e-24C3H family protein