PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY48453.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C3H
Protein Properties Length: 348aa    MW: 38427.8 Da    PI: 7.7218
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY48453.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.24.5e-06118138526
                 --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                  C+ f++ G+C  Gd C F+Hg
  TEY48453.1 118 VCSEFRK-GHCEKGDACEFSHG 138
                 7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MMGTVCTDHQ HKFHHSHQLL LSKKSLDIPP RKQLLLGRRD SESGADSSPG FSKFLPYNDG  60
SDSDSDDPYS SDHFRMYEFK VRKCNRSRSH DWTDCPFAHP GEKARRRDPR RFQYSGTVCS  120
EFRKGHCEKG DACEFSHGVF ECWLHPSRYR TEACKDGKSC KRKVCFFAHS SRQLRIVPDS  180
DASPAADKKS AAGHHCCLYC HGSMSDSPTS TLMGHMAHNT SPPLSPLGER GGGASSYRDA  240
LAELMASFEA MSPSSPAGRS SGLPWLDVNE VMSPGATAGR LPWLDVNLNV EEPQPQFMMS  300
PSTPVRRGHS KFYSGESKFS PGEYSGRNLA DDGGSGGPDL GWVNDLLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03790.12e-78C3H family protein