PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY48512.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 239aa MW: 27500.4 Da PI: 9.9394

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY48512.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	97.1	7.6e-31	18	68	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krie+++nrqvtf+kRrng+lKKA+ELSvLCdaeva+++fss+g+lyeys+ TEY48512.1 18 KRIESTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSN 68 79***********************************************95 PP
2	K-box	100.6	2.1e-33	92	186	6	100
K-box 6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++++++a + +qqe++kL+++i+ Lq ++R+++Ge+++sL lk+L+++e ++e+++++iR+kKnell+++ie +q++e el+++n+ Lr+k++e TEY48512.1 92 SEANTQAMVQFYQQEANKLRRQIRDLQASNRQMMGEGVTSLPLKDLKSMEGKVERAISRIRAKKNELLFAEIELMQRREIELHNANMFLRSKIAE 186 334788889***********************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MALCNQERKN GRGKIEIKRI ESTTNRQVTF CKRRNGLLKK AYELSVLCDA EVALVVFSSR 60 GRLYEYSNNS VRSTIDRYKK ATADSTSAVS TSEANTQAMV QFYQQEANKL RRQIRDLQAS 120 NRQMMGEGVT SLPLKDLKSM EGKVERAISR IRAKKNELLF AEIELMQRRE IELHNANMFL 180 RSKIAESERA QQQMSLMPAE AEYNEPMTSQ PYDPRSFLPM NLMEPPSYTR SDQTPLQLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18960.1	1e-96	MIKC_MADS family protein