PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY48568.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

WOX

Protein Properties

Length: 228aa MW: 25919.3 Da PI: 9.9284

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY48568.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	68	1.2e-21	88	147	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eq+ +Le l+++ r+p+a+++e+++++l +++ ++V++WFqN++a+e++ TEY48568.1 88 TRWNPTQEQIGILEMLYRRgMRTPNAQQIEQITAQLgkygKIEGKNVFYWFQNHKARERQ 147 7***************99************************************97 PP
2	Wus_type_Homeobox	118.1	3.9e-38	88	149	4	65
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 tRW+Pt+eQi iLe+ly++G+rtPn+++i++ita+L +yGkie+kNVfyWFQN+kaRerqkq TEY48568.1 88 TRWNPTQEQIGILEMLYRRGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQ 149 8***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MGIQAMKVHQ LPRGLIWDHD PPSLSLGCKR FRSLAPKLST AAADTLSSAT SSSFDLKSFI 60 KPDQCSPRNV DIHKKESSQV EAAQPGGTRW NPTQEQIGIL EMLYRRGMRT PNAQQIEQIT 120 AQLGKYGKIE GKNVFYWFQN HKARERQKQK RSSLGFSPST RTPPPPPFPD HASSLFLSLP 180 NKEEENNRYK RKCVFDEVSK YCREEEEGGD RTLKLFPLHP EGRSSFTD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46480.1	6e-53	WOX family protein