PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY49093.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

CAMTA

Protein Properties

Length: 896aa MW: 100363 Da PI: 5.6551

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY49093.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	129.2	1.6e-40	4	84	36	116
CG-1 36 sgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhyle 116 gsl L+n++++++frkDG+sw+k+kd kt+ E+he+LKvg+ e+l+cyYah+e np+fqrr+yw+Le +e+ivlvhy++ TEY49093.1 4 GGSLYLFNKRVLKFFRKDGHSWRKRKDQKTIAEAHERLKVGNAEALNCYYAHGEGNPNFQRRSYWMLEPVYEHIVLVHYRD 84 69*****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 896 aa Download sequence
MQSGGSLYLF NKRVLKFFRK DGHSWRKRKD QKTIAEAHER LKVGNAEALN CYYAHGEGNP 60 NFQRRSYWML EPVYEHIVLV HYRDIRVVSG LVLEGGLQGN EQSGSTSQLL SSSPSTFSPS 120 PTSFASELPD SSFVIGESYE SYHNESSPSS VEISSTQIVT NHIMNQSKAR ANEVYSSPGR 180 DMDQALERIK HQLSLNDDEV TECYKYNFEA EDSNDLDVLR EYEFSSLTPN SSGDILQGEG 240 VQQHQKPPGT EVDIWKEMML DVSKDFPCAE SPQQFGGHAT FTMPASLILE EVDSQKYRTY 300 TPTPHAYSPA CNSPLFYQDG LGISLDNNIS LTVAQKQRFT IREISPEWCY TSEGTKYSYD 360 TQVSDPRFKS YLQIIIIGSF FCDSSECEWA CMIGDTEVPV QIIQEGVLCC YAPAHLPGEV 420 SICITSGNRE ACSEVREFEY RAKSDVPAPS NLTGTEAYKN PDELVSLVRF IQMLLSDAQQ 480 ASESRNDEDS WSQVIDALLV GASTSSSTLD WLLQELLKEK LQLWLSSKLQ NNEEKGCSLS 540 KKEQGIIHMV AILGFEWALQ PILNSGVSVN FRDNNGWTAL HWAARYGREK MVAALIASGA 600 SAGAVTDPNS QDHTGKTPAS IAASYGHRGL AGYLSEVALT THLTSLTLVE SELSKGSAAL 660 EAERTINSIS STEYEDEDSL RQTLAAVRNA TQAAARIQSA FRAHSFRKRQ QWESAIPIGG 720 DEFSFLEKDA QGLSAASKLA FRSTRDYNLA AVSIQKKYRG WKGRKDFLSL RQKVVTIQAH 780 VRGYQVRKNY KVCWAVGVLE KVVLRWRRRG VGLRGFRPEQ ESIDESEDED ILKVFRKQKV 840 DEAIDEAVSR VLSMVESSEA RQQYHRLLSK YRQAKAKLQS ADSHPNIPSM ENEEIH

Sequence ? help Back to Top

Protein Sequence Length: 896 aa Download sequence

MQSGGSLYLF NKRVLKFFRK DGHSWRKRKD QKTIAEAHER LKVGNAEALN CYYAHGEGNP  60
NFQRRSYWML EPVYEHIVLV HYRDIRVVSG LVLEGGLQGN EQSGSTSQLL SSSPSTFSPS  120
PTSFASELPD SSFVIGESYE SYHNESSPSS VEISSTQIVT NHIMNQSKAR ANEVYSSPGR  180
DMDQALERIK HQLSLNDDEV TECYKYNFEA EDSNDLDVLR EYEFSSLTPN SSGDILQGEG  240
VQQHQKPPGT EVDIWKEMML DVSKDFPCAE SPQQFGGHAT FTMPASLILE EVDSQKYRTY  300
TPTPHAYSPA CNSPLFYQDG LGISLDNNIS LTVAQKQRFT IREISPEWCY TSEGTKYSYD  360
TQVSDPRFKS YLQIIIIGSF FCDSSECEWA CMIGDTEVPV QIIQEGVLCC YAPAHLPGEV  420
SICITSGNRE ACSEVREFEY RAKSDVPAPS NLTGTEAYKN PDELVSLVRF IQMLLSDAQQ  480
ASESRNDEDS WSQVIDALLV GASTSSSTLD WLLQELLKEK LQLWLSSKLQ NNEEKGCSLS  540
KKEQGIIHMV AILGFEWALQ PILNSGVSVN FRDNNGWTAL HWAARYGREK MVAALIASGA  600
SAGAVTDPNS QDHTGKTPAS IAASYGHRGL AGYLSEVALT THLTSLTLVE SELSKGSAAL  660
EAERTINSIS STEYEDEDSL RQTLAAVRNA TQAAARIQSA FRAHSFRKRQ QWESAIPIGG  720
DEFSFLEKDA QGLSAASKLA FRSTRDYNLA AVSIQKKYRG WKGRKDFLSL RQKVVTIQAH  780
VRGYQVRKNY KVCWAVGVLE KVVLRWRRRG VGLRGFRPEQ ESIDESEDED ILKVFRKQKV  840
DEAIDEAVSR VLSMVESSEA RQQYHRLLSK YRQAKAKLQS ADSHPNIPSM ENEEIH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	1e-151	CAMTA family protein