PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY49097.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 179aa    MW: 19746.5 Da    PI: 10.1936
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY49097.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF90.77.2e-2999149151
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                 +rie+ks rqvtfskRrng++KKA+ELSvLCd ++a+ii+ss gkly y+s
  TEY49097.1  99 ERIEDKSSRQVTFSKRRNGLFKKAKELSVLCDLDIALIIYSSPGKLYQYCS 149
                 69***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MSFYRTPKAP AAATVKPRPA AAVLVKTTSL RCDVGKSGDG YVHGPDGGGG DQCVDRKASS  60
YISQPVNVVS SKSPTSEIRI YFIFSPNLRK WGGGKLKIER IEDKSSRQVT FSKRRNGLFK  120
KAKELSVLCD LDIALIIYSS PGKLYQYCST HRTSGSENFH GKGVRQRCPE EDLRLDSDR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03710.34e-23MIKC_MADS family protein