PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY49216.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

SBP

Protein Properties

Length: 823aa MW: 91665.8 Da PI: 7.2052

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY49216.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	62.8	7.8e-20	122	170	1	49
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSE CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrf 49 +Cqv+gCe d+se+k yh+rh+vC +++a +v+++g+ +r+CqqC+++ TEY49216.1 122 RCQVPGCEDDISELKGYHKRHRVCLRCANAVSVVIDGEAKRYCQQCGKY 170 6**********************************************98 PP
2	SBP	43.3	9.5e-14	196	227	46	77
TSSEEETTT--SS--S-STTTT-------S-- CS SBP 46 CsrfhelsefDeekrsCrrrLakhnerrrkkq 77 C rfh ls+fDe+krsCrr+L++hn+rrr+k TEY49216.1 196 CCRFHILSDFDEGKRSCRRKLERHNNRRRRKP 227 9***************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 823 aa Download sequence
MEQNQIPTPP IEAQIPADDP TASSLFDWSD FLDFNVDEGL HPSSSLPHSE QEQEQEQAGG 60 SDPAQEKPGA VRKRDPRLLC SNFLARVPCA CPELDAKLAE EERQLPSKKR TRVARGPSGP 120 ARCQVPGCED DISELKGYHK RHRVCLRCAN AVSVVIDGEA KRYCQQCGKY APFFLLHLIM 180 DLAFVNAYIV LLESYCCRFH ILSDFDEGKR SCRRKLERHN NRRRRKPHDS KEGTEKESQP 240 IILADDLSGD DDDTGKDGIS LNGQIEEKEL LLESDGQVSV RGSQNLQSDS IVSLSTSGEP 300 HAKADTQDPA FKQSPPYCDN KSSFSSACPA GRISFKLYDW NPAEFPRRLR LQIFQWLASM 360 PVELEGYIRP GCTILTAFIA MPEPVWRKLL EEPALCIKNL VSSPGSLLSG RGAMHVYLND 420 MIFRITKDAT LVHEVKVKHR APKLHYIYPN CFEAGRPMEF MACGSHLLQP NFRFLISFAG 480 QYLAYKIRVS SPCEKGHANS ADHQLLKIYV PQIDIALSGP GFVEVSILAN LYPYPVLLDM 540 APYLQVENQS GLSNFIPILV GDKETCAEMV ILQQKSATPF SSSSQELECS PPRPACEVLA 600 SRQAEFSEFV LDVAWLLKKP ASKQKLTSSH ILRLNCLLKY LMEKESTVVL DGLCCSLRSA 660 MDNDLVDSDS VSDLRLLQKN MNTARRRLAP RSHQKVVADT PTPSGNCCSH SSKNDASSLI 720 PSSNLGLQRT VKKLIGLVRP RPSLNEDTTT VPLLQDEVIM NVDLQERPSR SWSSRTLSTW 780 RLLVMAVMAV GVCFGVCAVV VHPQRVGRIT STIHSCLFDN SGR

Sequence ? help Back to Top

Protein Sequence Length: 823 aa Download sequence

MEQNQIPTPP IEAQIPADDP TASSLFDWSD FLDFNVDEGL HPSSSLPHSE QEQEQEQAGG  60
SDPAQEKPGA VRKRDPRLLC SNFLARVPCA CPELDAKLAE EERQLPSKKR TRVARGPSGP  120
ARCQVPGCED DISELKGYHK RHRVCLRCAN AVSVVIDGEA KRYCQQCGKY APFFLLHLIM  180
DLAFVNAYIV LLESYCCRFH ILSDFDEGKR SCRRKLERHN NRRRRKPHDS KEGTEKESQP  240
IILADDLSGD DDDTGKDGIS LNGQIEEKEL LLESDGQVSV RGSQNLQSDS IVSLSTSGEP  300
HAKADTQDPA FKQSPPYCDN KSSFSSACPA GRISFKLYDW NPAEFPRRLR LQIFQWLASM  360
PVELEGYIRP GCTILTAFIA MPEPVWRKLL EEPALCIKNL VSSPGSLLSG RGAMHVYLND  420
MIFRITKDAT LVHEVKVKHR APKLHYIYPN CFEAGRPMEF MACGSHLLQP NFRFLISFAG  480
QYLAYKIRVS SPCEKGHANS ADHQLLKIYV PQIDIALSGP GFVEVSILAN LYPYPVLLDM  540
APYLQVENQS GLSNFIPILV GDKETCAEMV ILQQKSATPF SSSSQELECS PPRPACEVLA  600
SRQAEFSEFV LDVAWLLKKP ASKQKLTSSH ILRLNCLLKY LMEKESTVVL DGLCCSLRSA  660
MDNDLVDSDS VSDLRLLQKN MNTARRRLAP RSHQKVVADT PTPSGNCCSH SSKNDASSLI  720
PSSNLGLQRT VKKLIGLVRP RPSLNEDTTT VPLLQDEVIM NVDLQERPSR SWSSRTLSTW  780
RLLVMAVMAV GVCFGVCAVV VHPQRVGRIT STIHSCLFDN SGR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	213	225	RRKLERHNNRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18830.1	1e-173	SBP family protein