PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY49280.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

NF-YB

Protein Properties

Length: 234aa MW: 26672.4 Da PI: 5.9508

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY49280.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	179.7	2.6e-56	60	155	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +eqdrflPianv+rimkkv+P+n+kiskdaketvqecvsefisfvt+easdkcqrekrktingdd+lwa++tlGfedyv+plk+yl+kyr++egek TEY49280.1 60 KEQDRFLPIANVGRIMKKVIPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDILWAITTLGFEDYVNPLKIYLAKYRDIEGEK 155 89*******************************************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence
MSKTMKRDRD DFEDDENPQI GSSSRTPYTI SPDTNTSSYL KSTTNQNPYA SKNNNNNNNK 60 EQDRFLPIAN VGRIMKKVIP GNGKISKDAK ETVQECVSEF ISFVTGEASD KCQREKRKTI 120 NGDDILWAIT TLGFEDYVNP LKIYLAKYRD IEGEKLNVPK QQPLEQQQQQ QQQQQHMHHD 180 QNSPNIPYNS VYSTANLITQ PPFVSGDPPF PLPFSQSSIQ TGSLPQHDHV DDHW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G13570.1	1e-68	NF-YB family protein