PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY49559.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 159aa MW: 18194 Da PI: 10.3226

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY49559.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	85.7	2.7e-27	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk n+qvtfskRr g+lKKA+E+SvLCda+v ++ifss+gkl ey++ TEY49559.1 9 KRIENKVNQQVTFSKRRSGLLKKANEISVLCDADVGLMIFSSKGKLSEYAT 59 79***********************************************86 PP
2	K-box	73.6	5.6e-25	87	158	14	85
K-box 14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkek 85 s++ el kLk ++e Lq+++R+l G++Le Ls+keLq+ e+qL+ slkk Rs+Kn+l+ e+i+ + kk + TEY49559.1 87 PGSWNVELGKLKTRVEVLQKNNRNLSGDNLECLSMKELQNFEHQLDASLKKLRSQKNHLMNESISLMHKKVR 158 5689*****************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 159 aa Download sequence
MGRGKVELKR IENKVNQQVT FSKRRSGLLK KANEISVLCD ADVGLMIFSS KGKLSEYATD 60 SCMERILDRY KRCSSADERK PPDLQSPGSW NVELGKLKTR VEVLQKNNRN LSGDNLECLS 120 MKELQNFEHQ LDASLKKLRS QKNHLMNESI SLMHKKVRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60910.1	9e-68	MIKC_MADS family protein