PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY49620.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family Nin-like
Protein Properties Length: 305aa    MW: 35246 Da    PI: 4.952
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY49620.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK85.35.3e-27144193352
      RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                 k+++ +++s+yF++pi++AA+eL+v+lT+LK++CR++GI+RWPhRk+ sl
  TEY49620.1 144 KKLTRQMISQYFYMPITQAARELNVGLTLLKKRCRELGIQRWPHRKLMSL 193
                 799********************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MEINMGWSNY NQALTTIPKE DYDDVFSIPS QLPPLDLSGI LGFHGCEFGM EETIPHLSSD  60
LCLYHDPFYP PFDLHQNKTL VPECVFVDEL GGGTQVQTQP QQQQLLLLDY NGSTINDGKL  120
VVNEEKRVSN RSFEELEESN KNPKKLTRQM ISQYFYMPIT QAARELNVGL TLLKKRCREL  180
GIQRWPHRKL MSLQSLIKNE FGKEEGEGKL RESLQILEQQ RKLMEEIPDL QLEEKTKRLR  240
QAFFKANYKK RKLMGRIESS SSKSAEPAPL PHQNALALCS SADVIDYDEE DEEFKYFFAD  300
CFYSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.14e-42Nin-like family protein