PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY49649.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 282aa MW: 31794.4 Da PI: 5.2815

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY49649.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	114.2	8.6e-36	10	109	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 aCaaCk++rr+C+++C lap fpa+qp+ f+ vh+lFG+++++kllk+l++++r +a++s+ ++A +r r+PvyG++ +++l +q++ +++el+++ + TEY49649.1 10 ACAACKFQRRRCTPQCLLAPFFPADQPQVFQSVHRLFGVKHIQKLLKELHPDQRVMAIKSVKFHAAMRERNPVYGCLVEVQNLASQVQIAEEELHAVLQ 108 7*********************************************************************************************99877 PP DUF260 100 e 100 + TEY49649.1 109 Q 109 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MTLRSGSGQA CAACKFQRRR CTPQCLLAPF FPADQPQVFQ SVHRLFGVKH IQKLLKELHP 60 DQRVMAIKSV KFHAAMRERN PVYGCLVEVQ NLASQVQIAE EELHAVLQQL FYYRQQQQQQ 120 QQQQDTSPGD DYLSQLQLGM APPGNTAMAA LVQQDGQSEY NNLVATQASS GSNNVNVNVD 180 SLLMQKTCSY SNNNNDYHNN IDSIVMQSHL TTSQTMPTVP QDYNEMYSFF DNIDDRQSYV 240 GPKEVYESSL DSSVRDCTQS DEHMAENELK NAAACFSLTS FN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47870.1	2e-38	LBD family protein