PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY50088.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family MYB
Protein Properties Length: 297aa    MW: 33205.3 Da    PI: 8.8619
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY50088.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.23.8e-082872345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     rWT+ E +l+ +a ++l  +   +W ++a++++ g+t  +++  + 
       TEY50088.1 28 RWTAAENKLFENALALLDENtpeRWQKVAAMVP-GKTVGDVIRQYK 72
                     9********************************.****99998876 PP
2Myb_DNA-binding44.34.2e-14132176347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + k++G+g+W+ I+r +   Rt+ q+ s+ qky
       TEY50088.1 132 PWTEEEHKLFLMGLKKYGKGDWRNISRNFVISRTPTQVASHAQKY 176
                      8*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MRWDMEILSP SSYFSNSSWL LDESRSTRWT AAENKLFENA LALLDENTPE RWQKVAAMVP  60
GKTVGDVIRQ YKELEDDVSS IEAGLIPVPG YATSSPFTLE WGGAAHGYTF AGGRKAAPLG  120
RPSEQERKKG VPWTEEEHKL FLMGLKKYGK GDWRNISRNF VISRTPTQVA SHAQKYFIRQ  180
LSGGKDKRRA SIHDITTVNL NDHQSPSPET KKQPSPEQPS ILAPQSEKLP SYPWSQATNE  240
AVVGFGSLCH ANMFASPTYA TGSFGHKMHG QHLQRDVFIG SQNAVFQMQP ELHYPNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.11e-109MYB_related family protein