PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY50228.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 248aa MW: 27243.3 Da PI: 11.0181

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY50228.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14	0.00015	31	53	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C Cg+ F ++ L H++ H TEY50228.1 31 FRCRFCGRKFYSPQALGGHQNAH 53 89******************988 PP
2	zf-C2H2	19.4	2.8e-06	221	243	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C+ C+k Fs+ L rH+++H TEY50228.1 221 YHCGVCHKGFSSAKALFRHMQKH 243 89********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MIKNQETAEK NWLSLKPAQS TVTRPFPTKT FRCRFCGRKF YSPQALGGHQ NAHKRERGLA 60 RYFQDSMSRS LGVQPHALLR KPGSERAVMA AAVGSVRDFV WPGSYRAAGD CEEKLSSWIG 120 LDLNLKLVFL HVPEQRLGRT EPFVAHATVV HPTTLFVIVS RCRSLPAQQT PANSRHSPTA 180 RTLAFPGGHG GSGGASRVGG SLLGRKRVAV ADGDKEGGQL YHCGVCHKGF SSAKALFRHM 240 QKHLDRCM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G24625.1	2e-13	C2H2 family protein