PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY50232.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

HD-ZIP

Protein Properties

Length: 190aa MW: 21926.9 Da PI: 5.3643

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY50232.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.2	8.1e-20	29	82	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++++eqle Le+ F+++ ++ +++ +LAk+lgL+ rq+ +WFqNrRa++k TEY50232.1 29 KKRRLSNEQLEMLENSFHEEIKLEPDRKMKLAKELGLQPRQIAIWFQNRRARWK 82 45589************************************************9 PP
2	HD-ZIP_I/II	125.7	2.1e-40	29	119	2	92
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 kkrrls+eq+++LE+sF+ee kLep+rK++la+eLglqprq+a+WFqnrRAR+k k+lE+ y+aLk++yda+++++e+L++ev +Lre lk TEY50232.1 29 KKRRLSNEQLEMLENSFHEEIKLEPDRKMKLAKELGLQPRQIAIWFQNRRARWKGKRLEHLYDALKHEYDAVSRDREELQQEVMALREILK 119 9**************************************************************************************8876 PP

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence
MDWNAQELKQ QTMMPMMMMN ANNPEVDPKK RRLSNEQLEM LENSFHEEIK LEPDRKMKLA 60 KELGLQPRQI AIWFQNRRAR WKGKRLEHLY DALKHEYDAV SRDREELQQE VMALREILKD 120 HVAKKLVLST DISGDETVES TSIPSSDTVA AAPASTANLH QIAECNYPLD MGDYNNNTPP 180 CWATSMPSCP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	29	58	KKRRLSNEQLEMLENSFHEEIKLEPDRKMK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03790.1	2e-43	HD-ZIP family protein