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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | TEY50233.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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| Family | HD-ZIP | ||||||||
| Protein Properties | Length: 185aa MW: 21350.5 Da PI: 7.8733 | ||||||||
| Description | HD-ZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Homeobox | 61.2 | 1.6e-19 | 24 | 76 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+ ++++eqle Le+ F+ + ++ +++ +LAk+lgL+ rq+ vWFqNrRa++k
TEY50233.1 24 KKRLSNEQLELLENSFQDEIKLGPDRKMKLAKELGLQPRQIAVWFQNRRARWK 76
5569************************************************9 PP
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| 2 | HD-ZIP_I/II | 122.8 | 1.6e-39 | 23 | 113 | 2 | 92 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
kk+rls+eq++lLE+sF+ e kL p+rK++la+eLglqprq+avWFqnrRAR+k kqlE+ y+aLk++yda++ ++++L++ev +Lr+ lk
TEY50233.1 23 KKKRLSNEQLELLENSFQDEIKLGPDRKMKLAKELGLQPRQIAVWFQNRRARWKGKQLERLYDALKQEYDAVSMDRQKLQQEVMALRAMLK 113
9*****************999******************************************************************9887 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 185 aa Download sequence |
MKQHTMLPTI MEKNMNHLGV DPKKKRLSNE QLELLENSFQ DEIKLGPDRK MKLAKELGLQ 60 PRQIAVWFQN RRARWKGKQL ERLYDALKQE YDAVSMDRQK LQQEVMALRA MLKDHVAKNQ 120 VSTGYTDVSG EETVESTSIP SSDKQHPVAE AEVMTAVTSL HQMNMDDYNN TVMILPYSWA 180 TTSMP |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 23 | 52 | KKKRLSNEQLELLENSFQDEIKLGPDRKMK |
| 2 | 71 | 79 | RRARWKGKQ |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G03790.1 | 2e-45 | HD-ZIP family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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