PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY51479.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

CO-like

Protein Properties

Length: 349aa MW: 39012.5 Da PI: 5.0659

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY51479.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	25.6	2.5e-08	13	55	3	39
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 er C+ ++e ++ l+C+ ++ lC +C le H+ H++ TEY51479.1 13 ERLCDFCNESKALLYCRADSAKLCFSCDLEVHSTnplfqkHNR 55 799****99*******************66777777776 PP
2	zf-B_box	28.5	3.3e-09	56	99	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg....Htvvpl 42 C+ +++ + ++fC + + lC++C e+H++ H+++pl TEY51479.1 56 SLLCDSCSSSPSSIFCSTESAVLCQNCDWEIHNSfasiHDRRPL 99 568*****************************889999999876 PP
3	CCT	56.8	8.1e-20	305	348	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R+ al+RYkeK+ktR+++K++rYesRK++A+sR R+KGrF+k++ TEY51479.1 305 RDSALSRYKEKKKTRRYDKHVRYESRKVRAQSRVRIKGRFAKKD 348 899**************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MSEDIHSCTD ETERLCDFCN ESKALLYCRA DSAKLCFSCD LEVHSTNPLF QKHNRSLLCD 60 SCSSSPSSIF CSTESAVLCQ NCDWEIHNSF ASIHDRRPLE GFSGCPSVTD LLRFLGLQDF 120 GKNKLDLAAG NEFLDMLVWE TPTVVTLDDL IVANNYDDDS APALQSTGLP PFPKNRNASC 180 GKHMEEIFSQ LHEMAKKDPN YSGSLEAFVE NNQPQVTAKC PKETKVEEPA SNGDWCFVGG 240 VQDEGFPCAY FGDFSEMSHL VPDKDSDAAD SAGFGNGLQE IQPCVPVDSQ LPPTAATREL 300 NSQERDSALS RYKEKKKTRR YDKHVRYESR KVRAQSRVRI KGRFAKKDR

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MSEDIHSCTD ETERLCDFCN ESKALLYCRA DSAKLCFSCD LEVHSTNPLF QKHNRSLLCD  60
SCSSSPSSIF CSTESAVLCQ NCDWEIHNSF ASIHDRRPLE GFSGCPSVTD LLRFLGLQDF  120
GKNKLDLAAG NEFLDMLVWE TPTVVTLDDL IVANNYDDDS APALQSTGLP PFPKNRNASC  180
GKHMEEIFSQ LHEMAKKDPN YSGSLEAFVE NNQPQVTAKC PKETKVEEPA SNGDWCFVGG  240
VQDEGFPCAY FGDFSEMSHL VPDKDSDAAD SAGFGNGLQE IQPCVPVDSQ LPPTAATREL  300
NSQERDSALS RYKEKKKTRR YDKHVRYESR KVRAQSRVRI KGRFAKKDR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47890.1	1e-78	CO-like family protein