PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY51741.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

HB-PHD

Protein Properties

Length: 770aa MW: 85672.1 Da PI: 4.6645

Description

HB-PHD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY51741.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	39.1	1.3e-12	648	687	13	52
HHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS Homeobox 13 eeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 ++L e+F++n+yp+++++e LAk+lgL+ rqV+ WF N R TEY51741.1 648 QRLLEAFNENQYPDRATKENLAKELGLDFRQVRKWFDNTR 687 78999*********************************99 PP
2	PHD	39.1	1.8e-13	281	336	1	51
SBTTTSS..TCTTSSEEEBSS.SSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS PHD 1 rCkvCgk..sdeegelvlCdg.CkewfHlkClglkleseekpeg..ewlCeeCkek 51 +C+ Cg+ + +++++lCdg C++ fH+ Cl+++l ++++p g +wlC+ C++k TEY51741.1 281 FCAKCGSkdLTLDNDIILCDGaCERGFHQFCLEPPLLKTDIPPGdeSWLCPGCDCK 336 699*965555****66****************9999*****985 PP

Sequence ? help Back to Top
Protein Sequence Length: 770 aa Download sequence
MDDERPVSEK MEKNEMSEAQ HIEKPPFSAQ EKSHEVREIG LNNREIFHNG DPREQEPTLE 60 NVRICLDSEY LEVTSQNGFS CIEDMGIPPG TTSINPGCGA LVPLKVEANN NNDSIILEND 120 GTGSSRQRIK RRAKLEGPPS TSLLLRSRSQ ENPKAPEPVA VEIVNEGSAN KEKKRRGRKP 180 KNMQKTTVSE FSRKKNHLRY LLHKISYEQN LIDAYSAEGW RGQSLDKLKP EKELEKAKSR 240 ILNFKLKIRA LFQSLDQSLV MGKLPESLFD ARGEIDSEDI FCAKCGSKDL TLDNDIILCD 300 GACERGFHQF CLEPPLLKTD IPPGDESWLC PGCDCKADCI DMLKDVQEAK ISIIDSWEKI 360 FPEAAAAASG KKMDESSGLS SDDSEDEEYD PDKPDSSEKV EGNESSSDES SSFAASDDLA 420 ASNNNEKYLG LPSDDSEDDD FNPSAPNQDN QVKQDNSSSD FSSDSEDLRA LIEDETATSE 480 DHKQKSQGFS EEISTVGRKK RQSLKDELSY LAEASAEPLS RKRNVERLDY KKLNDETYGD 540 SASDSSDEDF DDIIRKRTKA DCDGVKFSDE TPVTPSNTHK EDENQIENKH IPKRTRRNQS 600 DGGTTESAAK ASSTSASAKI STQKRRLGEA TTKGFLMVIF NDGFVLVQRL LEAFNENQYP 660 DRATKENLAK ELGLDFRQVR KWFDNTRWSF NHRPSTGADG TPSHQNTESS AISTQNHIVK 720 PGEEMLVTGD SSENPATKKR KGNLNQTPGD EQNGIGNIQS AQLHSTNAVS

Sequence ? help Back to Top

Protein Sequence Length: 770 aa Download sequence

MDDERPVSEK MEKNEMSEAQ HIEKPPFSAQ EKSHEVREIG LNNREIFHNG DPREQEPTLE  60
NVRICLDSEY LEVTSQNGFS CIEDMGIPPG TTSINPGCGA LVPLKVEANN NNDSIILEND  120
GTGSSRQRIK RRAKLEGPPS TSLLLRSRSQ ENPKAPEPVA VEIVNEGSAN KEKKRRGRKP  180
KNMQKTTVSE FSRKKNHLRY LLHKISYEQN LIDAYSAEGW RGQSLDKLKP EKELEKAKSR  240
ILNFKLKIRA LFQSLDQSLV MGKLPESLFD ARGEIDSEDI FCAKCGSKDL TLDNDIILCD  300
GACERGFHQF CLEPPLLKTD IPPGDESWLC PGCDCKADCI DMLKDVQEAK ISIIDSWEKI  360
FPEAAAAASG KKMDESSGLS SDDSEDEEYD PDKPDSSEKV EGNESSSDES SSFAASDDLA  420
ASNNNEKYLG LPSDDSEDDD FNPSAPNQDN QVKQDNSSSD FSSDSEDLRA LIEDETATSE  480
DHKQKSQGFS EEISTVGRKK RQSLKDELSY LAEASAEPLS RKRNVERLDY KKLNDETYGD  540
SASDSSDEDF DDIIRKRTKA DCDGVKFSDE TPVTPSNTHK EDENQIENKH IPKRTRRNQS  600
DGGTTESAAK ASSTSASAKI STQKRRLGEA TTKGFLMVIF NDGFVLVQRL LEAFNENQYP  660
DRATKENLAK ELGLDFRQVR KWFDNTRWSF NHRPSTGADG TPSHQNTESS AISTQNHIVK  720
PGEEMLVTGD SSENPATKKR KGNLNQTPGD EQNGIGNIQS AQLHSTNAVS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	172	180	EKKRRGRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19510.1	1e-75	HB-PHD family protein