PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY52198.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 242aa    MW: 26886.4 Da    PI: 5.9755
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY52198.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF70.51.4e-222269148
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48
                k+ien snrqvtfskRr g++KKA+EL+vLC+ae+a+++ s   +++ 
  TEY52198.1 22 KKIENLSNRQVTFSKRRLGLFKKASELCVLCGAEIAIVVHSLGKRVFS 69
                68*************************************997777665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MVILKESGGK KTTQGRKKIE IKKIENLSNR QVTFSKRRLG LFKKASELCV LCGAEIAIVV  60
HSLGKRVFSF GHPSPEAVID RYLGGEREVG AAPAVNTREF NRHYSDVSNQ LELEKQRRDL  120
IEEAKRAEGY GGGGGDVFWW HQGVEEMELN ELEQYAEALD ELLKNVELRT KDLMISHLLP  180
PSVASASASL TMHNPTATAF DDAAAAGLYV AQNQMGNNFD YENFIAPNQG LDMVTSPAWL  240
NY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.12e-38M-type_MADS family protein