PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY52209.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 147aa MW: 17003.6 Da PI: 10.6382

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY52209.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	92.6	1.8e-29	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++nrqvtfskRrng+lKKA+ELS+LCdae+ +iifsstgkl++++s TEY52209.1 10 RIDNSTNRQVTFSKRRNGLLKKAKELSILCDAEIGLIIFSSTGKLHDFAS 59 8***********************************************86 PP
2	K-box	63.2	1e-21	81	142	9	70
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKn 70 + +++ + +q+e+++L+k+++ Lq+++R+llGe+L L++++Lq+Le+qLe+slk +R kK TEY52209.1 81 NPTSEIKVWQREAENLRKQLQYLQESHRKLLGEELAGLNIRDLQNLENQLETSLKGVRVKKA 142 45678999****************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 147 aa Download sequence
MGRGKIVIRR IDNSTNRQVT FSKRRNGLLK KAKELSILCD AEIGLIIFSS TGKLHDFAST 60 SMKSIIERYN KVKEEHYNLM NPTSEIKVWQ REAENLRKQL QYLQESHRKL LGEELAGLNI 120 RDLQNLENQL ETSLKGVRVK KASKNHV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37940.1	2e-71	MIKC_MADS family protein