PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY52343.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family YABBY
Protein Properties Length: 186aa    MW: 20791.7 Da    PI: 9.0716
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY52343.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY224.52.9e-6931603170
       YABBY   3 vfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssekl 101
                 +  ++e vCyv+Cn+Cntilav+vP+ s+f++vtvrCGhC++llsvn+    q +  ++         +l+++++   +++   ++++ +s++ + +  
  TEY52343.1   3 MELTAEPVCYVNCNYCNTILAVNVPFGSMFSIVTVRCGHCSNLLSVNMGALLQSVHLQDF--------QLQKQHSFAASVNAAATRDNGSSSKCNRYG- 92 
                 6678999**************************************999988877766664........455555556666666666666666665554. PP

       YABBY 102 senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                 s + + e p++pp irPPekrqrv saynrfikeeiqrikasnPdishreafs+aaknWahfP+ihfgl
  TEY52343.1  93 SPHVHTEQPKMPP-IRPPEKRQRVLSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL 160
                 7888899999999.9****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MSMELTAEPV CYVNCNYCNT ILAVNVPFGS MFSIVTVRCG HCSNLLSVNM GALLQSVHLQ  60
DFQLQKQHSF AASVNAAATR DNGSSSKCNR YGSPHVHTEQ PKMPPIRPPE KRQRVLSAYN  120
RFIKEEIQRI KASNPDISHR EAFSTAAKNW AHFPHIHFGL KMESNKQAKL DHPVAEEATP  180
QKSLGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.17e-76YABBY family protein