PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY52662.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family ARF
Protein Properties Length: 886aa    MW: 97846.1 Da    PI: 6.5091
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY52662.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B376.33.3e-24134235199
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f+k+lt sd++++g +++p++ ae+        + ++ +  +l+ +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   ++++ ++
  TEY52662.1 134 FCKTLTASDTSTHGGFSVPRRAAEKVfppldysQTPPVQ--ELIAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFI--WNENNQM 228
                 99****************************985544444..8************************************************..8888889 PP

                 EEEEE-S CS
          B3  93 vvkvfrk 99 
                 +++++r+
  TEY52662.1 229 FLGIRRA 235
                 9**9997 PP
2Auxin_resp1201.9e-39260343183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 aahaa+t+s+F+++YnPras+s+Fv++++k+ ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdldpvrWp S+Wrs+k
  TEY52662.1 260 AAHAAATNSPFTIFYNPRASPSDFVIPLAKYAKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPSSHWRSVK 343
                 79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 886 aa     Download sequence    
MRLSSSSSST NTGFNDQSEE GEKKCLNSEL WHACAGPLVS LPQLGSRVVY FPQGHSEQVS  60
ASSNKEVDGA VPNYPGLQPQ LICQLHNVTM HADVETDEVY AQMTLQPLTP QEQKDICLLP  120
SELGTPSKQP TNYFCKTLTA SDTSTHGGFS VPRRAAEKVF PPLDYSQTPP VQELIAKDLH  180
GNEWKFRHIF RGQPKRHLLT TGWSVFVSAK RLVAGDSVIF IWNENNQMFL GIRRASRPQT  240
VMPSSVLSSD SMHIGLLAAA AHAAATNSPF TIFYNPRASP SDFVIPLAKY AKAVYHTRVS  300
VGMRFRMLFE TEESSVRRYM GTITGISDLD PVRWPSSHWR SVKVGWDESA AGERQPRVSL  360
WEIEPLTTFP MYPSPFSLRL KRPWPTGLPS FPGLKDGDMG MNFPMPWLRG GVGDQGLQSL  420
NFQGVSPWML PRLDNSNLCL QPDIYQVMAA AAMQDTGSLD PSKILNQSFQ FQQNAPNVSA  480
SLLQNQMLQQ PHSQQSFLQN LPESSIVSQA QMLHQQLQGR HSFINHLQQQ LTPQQLNPQF  540
QDQVTKKSIP ASLQMGLTSE SQFTPVQALS STSQLQNFSN LIGNHMASSN NSSMQSVLSS  600
FSCEGTSPHM NLNGPHPLVS HSPAKRVALD PQLPSKVSHF GVPHLEELVT PNSKVSDLSA  660
LLPPFHGKEF SDFQGVAHSP DNLMFGVGMS NLRNSGNANE PLSMAYANPT FPSGSGTEFP  720
LNSDMTSSSC VDGSGYMQSS ENVDQTNPTS RAFVKVHKLG SFGRSLDISK FSCYSELRSE  780
LARMFGLEGL LEDPQRSGWQ LVFVDRENDI LLLGDDPWQE FVNSVWYIKI LSPVEVQQMG  840
KEGLDLPDSA QNHRVSTSSN SCDDYMSRKD SRSGLNGIPS VGSLEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37020.20.0ARF family protein