PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY52784.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family MIKC_MADS
Protein Properties Length: 258aa    MW: 29422.8 Da    PI: 7.3097
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY52784.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF84.27.7e-271767151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                k+ien   rqvtfskRr g+lKKA+EL vLCda+vaviifs tgklye++s
  TEY52784.1 17 KKIENVNSRQVTFSKRRGGLLKKANELAVLCDAQVAVIIFSGTGKLYEFAS 67
                68***********************************************86 PP
2K-box59.91.1e-2010118615100
       K-box  15 eslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                 e+ + e++ L+ eie+L   +R+++G++L++L+++eL++Le+qL ++l +i+++K++l+leq+e++ ++ek++  +n+aL +k+ee
  TEY52784.1 101 EQPTVEIEALRHEIEELHLMNRRMMGKELDELTYNELHKLEHQLAEGLLSIKDRKEKLILEQMERSNQQEKKIALQNEALLEKIEE 186
                 566789************999**************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MHCIKESKMG RGKIEIKKIE NVNSRQVTFS KRRGGLLKKA NELAVLCDAQ VAVIIFSGTG  60
KLYEFASSCM EQIVARYHQT RGRLQLAAAD VQPDNQVILH EQPTVEIEAL RHEIEELHLM  120
NRRMMGKELD ELTYNELHKL EHQLAEGLLS IKDRKEKLIL EQMERSNQQE KKIALQNEAL  180
LEKIEELRQQ ARVSSNIENH LSLSKDCCLS SSSMHEWRSK EVASDTSLRL GISPISAIAS  240
EATKMPKLEK SNDVMHLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57390.15e-52MIKC_MADS family protein