PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY52808.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 286aa MW: 32298.2 Da PI: 9.8735

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY52808.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.6	1.4e-18	13	57	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+W++eEd ll ++v+++G+++W+ I++ ++ gR++k+c++rw + TEY52808.1 13 KGPWSPEEDYLLQRLVQKHGPRNWSMISKSIP-GRSGKSCRLRWCN 57 79****************************.*********87 PP
2	Myb_DNA-binding	36.6	1e-11	80	111	14	47
HHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 14 davkqlGggtWktIartmgkgRtlkqcksrwqky 47 +a++++G++ W+tIar + gRt++ +k++w++ TEY52808.1 80 RAHARFGNK-WATIARLLS-GRTDNAIKNHWNST 111 69*****.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MANLNKTDMD RIKGPWSPEE DYLLQRLVQK HGPRNWSMIS KSIPGRSGKS CRLRWCNQIS 60 PQVEHRAFTP DEDDTSIRTR AHARFGNKWA TIARLLSGRT DNAIKNHWNS TLKRKSSSFA 120 SDDSPPLKRS ASAGSAPADF PPPSPSASDS VSTHTSFLPD TPTGLTLSLP GIDQSTDSHS 180 NSPKINPNSI QLAPIQRQTE ANSVNFTTEL MGVMQEMIRA EVRNYMVGLE EQRRRIEELE 240 KQHNRLFLHH QQQKQFQFQF QEMCMNMNVN EGFRNAAAAI GISRVD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	7e-74	MYB family protein