PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY52824.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 149aa MW: 16101.1 Da PI: 7.8439

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY52824.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	135.3	2.3e-42	14	112	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+C ++C++apyfp e+p kf nvhk+FGasnv+kll+++p ++reda++sl+yeAear++dPvyG+vg i+ lq+q+ +l+ el+++++ TEY52824.1 14 PCAACKFLRRRCLSGCIFAPYFPPEEPTKFVNVHKIFGASNVSKLLNEIPAHQREDAVNSLTYEAEARLKDPVYGCVGAITILQRQVFTLQRELDATNA 112 7*********************************************************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 149 aa Download sequence
MAASSSSSSF SKPPCAACKF LRRRCLSGCI FAPYFPPEEP TKFVNVHKIF GASNVSKLLN 60 EIPAHQREDA VNSLTYEAEA RLKDPVYGCV GAITILQRQV FTLQRELDAT NADIMRFASG 120 TGAPRGSGSG YDDPNSTDYW TGKGQDGGI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27650.1	4e-65	LBD family protein