PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY53163.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family HD-ZIP
Protein Properties Length: 173aa    MW: 19946.6 Da    PI: 8.6572
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY53163.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.18.1e-2078132256
                 T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 rk+ +++++q++ Le+ F+++ +p++ +++ LA kl+L+ rqV vWFqNrRa+ k
  TEY53163.1  78 RKKLRLNRDQTTLLEDSFRQHTTPNTGQKQALAGKLNLKPRQVEVWFQNRRARSK 132
                 6778899**********************************************98 PP
2HD-ZIP_I/II111.74.7e-3678169192
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                  +kk+rl+++q +lLE+sF+++++ ++ +K++la +L+l+prqv+vWFqnrRAR k+kq+E+++e Lk+++++l++en+rL+kev eLr++l+
   TEY53163.1  78 RKKLRLNRDQTTLLEDSFRQHTTPNTGQKQALAGKLNLKPRQVEVWFQNRRARSKLKQTEVECEILKKKCERLSDENRRLKKEVMELRSSLN 169
                  69**************************************************************************************9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MDNNGDGEVC LGLSLGLGLP ESCSNREVSQ NKITRLLLLD LSFPIHPNNH ELNSSQMIRA  60
DEDHSASKDD EHEISYGRKK LRLNRDQTTL LEDSFRQHTT PNTGQKQALA GKLNLKPRQV  120
EVWFQNRRAR SKLKQTEVEC EILKKKCERL SDENRRLKKE VMELRSSLNL EKP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1127135RRARSKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.15e-41HD-ZIP family protein