PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY53207.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 203aa    MW: 22102.6 Da    PI: 7.2033
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY53207.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260126.71.1e-39331331100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkC ++C++ap+f ++q +++fa+vhk+FGasnv+kll ++p+++r+da+ ++ yeA+ar++dPvyG+v++i +lqqq+++l+ael++++
  TEY53207.1  33 PCGACKFLRRKCISGCIFAPHFGSDQgAARFAAVHKVFGASNVSKLLLHIPPNRRHDAVVTISYEAQARLSDPVYGCVSTIIALQQQVASLQAELSVVQ 131
                 7***********************9989*********************************************************************99 PP

      DUF260  99 ee 100
                 ++
  TEY53207.1 132 TQ 133
                 87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MDVPAQDDGT SESRRKGPGK RSHSEAVPAP NAPCGACKFL RRKCISGCIF APHFGSDQGA  60
ARFAAVHKVF GASNVSKLLL HIPPNRRHDA VVTISYEAQA RLSDPVYGCV STIIALQQQV  120
ASLQAELSVV QTQVMNSRYV MANAFHNSTQ QQQQQQNICY SNTSSASNNL ISLHSFSPNF  180
GEIHEEEEES NDPAIAFANN IFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03760.17e-74LBD family protein