PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY53602.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 234aa MW: 25518.5 Da PI: 8.4994

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY53602.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.3	0.00024	171	193	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F + L H+r+H TEY53602.1 171 HECSYCGAEFASGQALGGHMRKH 193 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence
MSDCIDFSNE KNATLLEKQL DWNSDLEIDR DGGGCGGGGD AVFEHRRHRE RQRTKRQRPN 60 SPFSFTITPP PRAASEESTT TEEADTARCL ILLSQGHFIP ITKTRRDAAM YTCKTCNRSF 120 QSFQALGGHP RQPQEAKNEK RYAIFSPTSL SLQLSSVSTT ATAAMKSPRV HECSYCGAEF 180 ASGQALGGHM RKHRGGAAPP IPTNIREAIV FDEAEERMKG GKLAVVGSQS SGAG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	51	56	RQRTKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	7e-21	C2H2 family protein