PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY53673.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 190aa MW: 21680.9 Da PI: 9.1156

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY53673.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	135.4	2.1e-42	40	138	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC ++Cv+apyfp e+p kf nvhk+FGasnv+kll+++ +++reda++sl+yeAear++dPvyG++g i+ lq+q+ +l++el+++++ TEY53673.1 40 PCAACKFLRRKCLPGCVFAPYFPPEDPTKFVNVHKIFGASNVSKLLNEILPHQREDAVNSLAYEAEARLKDPVYGCIGAISVLQRQVLHLQKELEATNA 138 7*********************************************************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence
MLFRFLHKDP YFISFPILAH WKRFYRKRMA SSSSSHSNPP CAACKFLRRK CLPGCVFAPY 60 FPPEDPTKFV NVHKIFGASN VSKLLNEILP HQREDAVNSL AYEAEARLKD PVYGCIGAIS 120 VLQRQVLHLQ KELEATNADL ICYTSNEIAV HHQRRMAYGS GVGSYHPNPG YYYYGENPGH 180 GTSYMIFTMI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27650.1	1e-64	LBD family protein