PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY53817.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C3H
Protein Properties Length: 316aa    MW: 35323.7 Da    PI: 7.2098
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY53817.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH47.62.7e-15232256226
                 -S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                 ktelC+ +++tG C+yGd C+FaHg
  TEY53817.1 232 KTELCNKWQQTGACPYGDDCQFAHG 256
                 9***********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MQREISISSG ISTLPFNGEF DFDPSMYSSN YIHSDESSNY SSAESERALA SSPCLPQFQQ  60
LLNQDLAIRH RMVLSRLRSV AKQARTLRQE NVNLKMANID LNNRLNLLLN SLPPFRGVES  120
DPPGLDNILN RFRKMSAEEE GTSENEAVGV AQSPTSVMDS GQGGLGEKQL HFPKCISVRS  180
NGYLKAARAY GNVSGSGVVK PSNENNGTQK VYVKGEEEQA VELEVYNQGM LKTELCNKWQ  240
QTGACPYGDD CQFAHGIAEL RPVIRHPRYK TEVCRMILHG VPCPYGHRCH FRHTLTEEEE  300
LVRGRNSNSL QPMSCR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68200.18e-57C3H family protein