PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY54351.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

HD-ZIP

Protein Properties

Length: 222aa MW: 26310.6 Da PI: 6.309

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY54351.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	63.5	3.2e-20	58	110	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++++++eq++ Lee+F +++++ e++e+LA++lgL rqV vWFqNrRa++k TEY54351.1 58 KRKLSEEQVKMLEECFGSEQKLESERKERLAAELGLYPRQVAVWFQNRRARWK 110 45899***********************************************9 PP
2	HD-ZIP_I/II	111.1	7.3e-36	57	141	2	86
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekevee 86 +kr+ls+eqvk+LEe+F +e+kLe+erK++la eLgl prqvavWFqnrRAR+k+ +l ++y++Lk+ +d+ + +++rLe+ev+e TEY54351.1 57 RKRKLSEEQVKMLEECFGSEQKLESERKERLAAELGLYPRQVAVWFQNRRARWKSNKLQEEYSKLKSDHDNAVLHKCRLETEVRE 141 8********************************************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MNTEVDEQMA LISQYYPDAI YTQFVPEHGA ASKPKTRRRR RKNKRCEGGR EGDGVMRKRK 60 LSEEQVKMLE ECFGSEQKLE SERKERLAAE LGLYPRQVAV WFQNRRARWK SNKLQEEYSK 120 LKSDHDNAVL HKCRLETEVR EYPMSFYYYC DRNELLKLKE QLQEAEKEIQ RLSDGFSSNS 180 PCSSFSMEAP PFLGEFGMEG LENVFYNSDQ NNGMEWDNLY YM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	37	45	RRRRRKNKR
2	37	60	RRRRRKNKRCEGGREGDGVMRKRK
3	38	61	RRRRRKNKRCEGGREGDGVMRKRK
4	39	62	RRRRRKNKRCEGGREGDGVMRKRK
5	40	63	RRRRRKNKRCEGGREGDGVMRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36740.1	1e-48	HD-ZIP family protein