PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY54359.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 426aa    MW: 47216.3 Da    PI: 4.7106
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY54359.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3511.9e-107624253373
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                 ++L++cA+ +s+++ e+a + L rl++ +s +gdp++R+ +yf eAL +r+++   +++    +s+++ ++ +e + ++k+f++++P+ kf+hltaNqa
  TEY54359.1  62 SALMDCAR-LSESNPENAVKSLIRLQDSVSDHGDPLERVSHYFSEALYSRVYQ---KTS----ASAAAATSAEEFTLSYKAFNDACPYSKFAHLTANQA 152
                 68*****9.677799*************************************9...222....23333344689999********************** PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                 Ilea+e+++ +Hi+Df+i qG+QW+a+lqaLa+Rp+g+p ++Ri g+ +p+ g   + +l +tg+rL++fA+ l+++fef++ + + +++l+ +++rv+
  TEY54359.1 153 ILEATEKATNIHIVDFGIVQGIQWAAFLQALATRPAGKPkRIRISGIPAPALGdsPAPSLLATGNRLQEFANLLDLEFEFDP-ILTPVHELTASSFRVD 250
                 ***********************************66665**********99998999************************.799************* PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 p+Ea+aVn++lql++lldes +  +   + L+l k+l P vv++ e e+++n+  Fl+rf +al+yy a+f+sle +l+re+ eri +Er ll+r+i  
  TEY54359.1 251 PDEAVAVNFMLQLYNLLDESDDGVE---AALNLAKGLDPCVVTLGEYEVSLNRVGFLTRFKNALKYYIAVFESLELNLSREAPERIELERLLLRRRIAG 346
                 *****************99888877...9********************************************************************** PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveee..sgslvlgWkdrpLvsvSaW 373
                 vv + +++ rer+e +e+Wr  +e aGF+p+++s++a +qa+ ll +++ s  y++ ++   g l l W++ pL++vS+W
  TEY54359.1 347 VVGHGNRK-RERMEDKERWRVLMEGAGFRPLAFSHYAISQANILLWNYSsSAMYKLVDSspPGFLSLAWNEVPLLTVSSW 425
                 **998887.9***************************************8888**99772245566************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    
METLMAGAST DTQSDWQTSP LYPSDPFPPP PSDLIFSDPP WAPPSSDPQS NPSKDDQFPI  60
FSALMDCARL SESNPENAVK SLIRLQDSVS DHGDPLERVS HYFSEALYSR VYQKTSASAA  120
AATSAEEFTL SYKAFNDACP YSKFAHLTAN QAILEATEKA TNIHIVDFGI VQGIQWAAFL  180
QALATRPAGK PKRIRISGIP APALGDSPAP SLLATGNRLQ EFANLLDLEF EFDPILTPVH  240
ELTASSFRVD PDEAVAVNFM LQLYNLLDES DDGVEAALNL AKGLDPCVVT LGEYEVSLNR  300
VGFLTRFKNA LKYYIAVFES LELNLSREAP ERIELERLLL RRRIAGVVGH GNRKRERMED  360
KERWRVLMEG AGFRPLAFSH YAISQANILL WNYSSSAMYK LVDSSPPGFL SLAWNEVPLL  420
TVSSWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.11e-159GRAS family protein