PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY54450.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C3H
Protein Properties Length: 265aa    MW: 27732.6 Da    PI: 8.9183
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY54450.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH28.42.8e-096994227
                -S---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH  2 ktelCrffartGtCkyGdrCkFaHgp 27
                kt++C+ +     Ck+Gd+C+FaHg+
  TEY54450.1 69 KTKICNKYKTAEGCKFGDKCNFAHGE 94
                89**********************96 PP
2zf-CCCH31.53e-10233258127
                 --S---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
                 +kt+lC +f + G C +GdrC+FaHg+
  TEY54450.1 233 FKTKLCENFGK-GSCTFGDRCHFAHGE 258
                 69*********.*************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MSCNRNGLLI KCVAGCPFGE NCHFLHHVPG GYNAVAQMMN LAPAPTPRPV GGPPLPAHQN  60
GYGSPAAVKT KICNKYKTAE GCKFGDKCNF AHGEWELGKP IVPSHSHDNP HLAAGPMPGR  120
FSARPELHAP GPTANFGLTA TTKISVDASL AGAVIGKGGV NSKQICRQTG TKLSIRDHEA  180
NPNLKNIELE GTFEQIQQAS VMVRELILSI GSGGAGELGR GAVAASTGRG GNFKTKLCEN  240
FGKGSCTFGD RCHFAHGEAE LRKTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12130.13e-59C3H family protein