PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY54594.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 129aa    MW: 14306.2 Da    PI: 5.74
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY54594.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF39.38.5e-131055247
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47
                 i nks r++tf+kRr+g++ K eEL+   d e  vi fs  g+ y
  TEY54594.1 10 LIANKSYRHTTFTKRRKGLMNKTEELCRASDSEGIVISFSDAGNCY 55
                699*************************************999865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    
MVRRNIEIKL IANKSYRHTT FTKRRKGLMN KTEELCRASD SEGIVISFSD AGNCYCLGHP  60
DIGSVLHRYL GEEERVRGGE EAEKIMGDAL ESGEWAEAAK GLGLDGLDRF YAELENVSRK  120
LEALAAALS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36590.12e-14M-type_MADS family protein